ORCID

Abstract

Despite a rise in the use of functional Near Infra-Red Spectroscopy (fNIRS) to study neural systems, fNIRS signal processing is not standardized and is highly affected by empirical and manual procedures. At the beginning of any signal processing procedure, Signal Quality Control (SQC) is critical to prevent errors and unreliable results. In fNIRS analysis, SQC currently relies on applying empirical thresholds to handcrafted Signal Quality Indicators (SQIs). In this study, we use a dataset of fNIRS signals (N = 1,340) recorded from 67 subjects, and manually label the signal quality of a subset of segments (N = 548) to investigate the pitfalls of current practices while exploring the opportunities provided by Deep Learning approaches. We show that SQIs statistically discriminate signals with bad quality, but the identification by means of empirical thresholds lacks sensitivity. Alternatively to manual thresholding, conventional machine learning models based on the SQIs have been proven more accurate, with end-to-end approaches, based on Convolutional Neural Networks, capable of further improving the performance. The proposed approach, based on machine learning, represents a more objective SQC for fNIRS and moves towards the use of fully automated and standardized procedures.

Keywords

Deep learning, functional near infrared spectroscopy, machine learning, signal quality control

Publication Date

2022-01-01

Publication Title

IEEE Transactions on Neural Systems and Rehabilitation Engineering

Volume

30

ISSN

1534-4320

First Page

2292

Last Page

2300

Deposit Date

2026-07-07

Creative Commons License

Creative Commons Attribution 4.0 International License
This work is licensed under a Creative Commons Attribution 4.0 International License.


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